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Old 10-25-2016, 05:26 PM   #2
zhanghao
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Location: BEIJING

Join Date: Nov 2015
Posts: 17
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another question is:

I have 3 pairs of pair-end fastq data sets, how to set them as input? In hisat2, I can use "-1 read_A_1.fq,reads_B_1.fq,reads_C_1.fq -2 read_A_2.fq,reads_B_2.fq,reads_C_2.fq", in bbmap, it seems just in1 and in2 are supported.
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