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Old 11-26-2012, 03:30 PM   #23
Peppe
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Location: USA

Join Date: Nov 2012
Posts: 11
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As you guys can see in the previous messages, I am new in this field. I am using the public Galaxy server, and for the first time I run sample with TopHat-Cufflink-Cuffcompare-Cuffdiff. Can anyone tell me how to get the data generated by Cuffdiff? Is there any tool in Galaxy for visualizing them? I am interested in gene/transcript differential expression testing. Should I select only the genes with significance YES?
Thank you
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