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Old 02-09-2017, 07:17 AM   #5
GenoMax
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Location: East Coast USA

Join Date: Feb 2008
Posts: 7,015
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Quote:
Originally Posted by sfh838t View Post
I am sure there is duplication, though I do not know how to find or eliminate that and would appreciate any hints as to where to read about this or find tools to work with this.
@Brian's post gives directions on how to use clumpify.sh from BBMap to identify, mark/eliminate duplicates. They can be optical or all (PCR+ optical).
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