Dear all,
since I'm not deeply into protein-coding genes I wanted to ask If I have already huge number of assembled RNA sequences (EST) from illumina is there a piplines for automatic annotation of sequences based on homology (for example to Arabidopsis proteins with blastX) or I should write my oun script?
Thanks
PS
the new seqs from illumina are plant with non-sequenced genome
since I'm not deeply into protein-coding genes I wanted to ask If I have already huge number of assembled RNA sequences (EST) from illumina is there a piplines for automatic annotation of sequences based on homology (for example to Arabidopsis proteins with blastX) or I should write my oun script?
Thanks
PS
the new seqs from illumina are plant with non-sequenced genome
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