View Single Post
Old 01-17-2012, 02:16 PM   #4
SamH
Member
 
Location: Moscow, ID

Join Date: Sep 2010
Posts: 16
Default

Yeah, adding -B made that SNP appear:

NC_015433.1_Ss_ST3 569984 . A C 999 . DP=1328;VDB=0.0735;AF1=1;AC1=6;DP4=0,0,657,577;MQ=37;FQ=-288 GT:PL:GQ 1/1:255,255,0:99 1/1:255,255,0:99 1/1:255,255,0:99


thanks for the tip!

Sam
SamH is offline   Reply With Quote