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Old 10-18-2013, 04:19 AM   #2
Devon Ryan
Location: Freiburg, Germany

Join Date: Jul 2011
Posts: 3,480

It kind of depends on how the "diff files" were made. It could be that only significantly DE genes were written, or that these genes were just filtered out in some experiments, or something else entirely. Even if they were filtered out, I wouldn't necessarily take that to mean the genes aren't expressed, just that they didn't produce enough signal to be useful (assuming there was filtering done and, if so, done properly).
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