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Old 07-06-2010, 08:54 PM   #4
robs
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Location: San Diego, CA

Join Date: May 2010
Posts: 116
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1. Take a look at the 454 manuals (SW-Manual_PartC_Assembler-Mapper-SFFTools; section 3). If you want to convert the sff to e.g. fasta you want to use sffinfo.

2. Not sure what you mean with "when I enter a reference, most samples are not represented in the variations". Sorry.
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