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Hi,
I have motifs(10-15 nt length) identified in the chip-peak regions. I would like to check whether the identified motif regions are evolutionary conserved across species.
One way I know is to check it in the UCSC browser and view the conservation alignments. May I know is there any faster way to do this if we have around 50 sequences to check . Any ideas is of great help.
I have motifs(10-15 nt length) identified in the chip-peak regions. I would like to check whether the identified motif regions are evolutionary conserved across species.
One way I know is to check it in the UCSC browser and view the conservation alignments. May I know is there any faster way to do this if we have around 50 sequences to check . Any ideas is of great help.