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Old 10-21-2013, 04:04 PM   #1
pmad
Bioinformatics Engineer
 
Location: University of Cambridge, UK

Join Date: Jun 2010
Posts: 14
Default CexoR: peak-pair calling in ChIP-exo data with replicates

Dear bioinformatics community,

If you are producing of analyzing ChIP-exo data (Rhee HS, Pugh BF, 2011, Cell 147:1408-19) with replicates, you might want to consider CexoR to uncover high-resolution protein-DNA interactions. It processes data data in BAM aligment format. Devel version is
at: http://bioconductor.org/packages/dev...tml/CexoR.html


Best regards,
Pedro Madrigal

Research Associate
Wellcome Trust Sanger Institute
Wellcome Trust Genome Campus
Hinxton,
Cambridge, CB10 1SA
UK
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Pedro Madrigal
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