View Single Post
Old 01-20-2015, 07:55 AM   #2
dpryan
Devon Ryan
 
Location: Freiburg, Germany

Join Date: Jul 2011
Posts: 3,480
Default

What would a pileup of the uncovered region between mates even look like. They couldn't contribute any sequence, so what would you show for them? The only conceivable reason I could think of to do this is in peak calling for chip-seq or something like that, but then you don't care about the actual sequence so there'd be no point in going to full pileup route.
dpryan is offline   Reply With Quote