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Old 08-23-2015, 03:02 AM   #1
Location: porto

Join Date: Aug 2015
Posts: 13
Default Reciprocal blast (RBH) - help


Im new in the bioinformatic world so be patience if my question is dummy.

I have two fasta files and I run blast reciprocal best hits (RBH) for blastp using the script from peterjc that you can be found here:

So, the output gives me:A_id, B_id, A_length, B_length, A_qcovhsp, B_qcovhsp, length, pident and bitscore.

But Im also interested in other options as e-values etc...

Anyone knows if there is an away of change the script that Im using to obtain other results or if there is another script that can give these options ?

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