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Old 12-06-2010, 11:40 AM   #36
Junior Member
Location: Saskatoon

Join Date: Apr 2010
Posts: 2
Question DIAL by Dr. Ratan for SNP without reference genome

Hi, Everyone:

I am trying to use DIAL without success for unknown reason, even following exact instructions. So I am wondering if anyone in our community is using the DIAL to get SNP and sharing some experience. I contacted Dr. Ratan at Penn State, but got no response. Any comments on DIAL?

I have a 454 sequencing run of 8 samples with barcodes each and got individual .sff file. When I perform DIAL by adding each .sff file, it worked sometime, and some time not working. I tested it with the supplied data and it worked for Adding but not working with Update (it returns with $ without error, but I check ps showing no such task).
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