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colindaven · 07-01-2019, 03:52 AM

The error says it all "could not find bedGraphToBigWig".

Have a read about Linux and PATH and and or install/configure this program properly in your PATH.

Else try deeptools via bioconda, it's likely to work better.

07-01-2019, 03:52 AM	#2
colindaven Senior Member Location: Germany Join Date: Oct 2008 Posts: 417	The error says it all "could not find bedGraphToBigWig". Have a read about Linux and PATH and and or install/configure this program properly in your PATH. Else try deeptools via bioconda, it's likely to work better.