View Single Post
Old 04-08-2015, 01:01 AM   #1
Location: Uganda

Join Date: Jan 2015
Posts: 71
Default Calculating percentage of reads aligning to a subject

I have done a blast on virus contigs and obtained hits matching to virus (strains/isolates) in the database. I would like to calculate the percentage of reads that are aligning to the viruses in the database. Can someone guide me on how to do this?
kaps is offline   Reply With Quote