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Old 08-13-2015, 05:56 AM   #1
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Location: chicago

Join Date: Jul 2012
Posts: 354
Default samtools bam2fastq command

I have samtools installed to /usr/bin, it was installed using sudo -apt-get install samtools on ubuntu. Is the below command incorrect? Thanks .

 bam2fastq -o IonXpress_009_150603.fq --no-unaligned IonXpress_009_150603.bam
bam2fastq: command not found
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