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Old 10-18-2011, 05:23 AM   #2
Bukowski
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Location: UK

Join Date: Jan 2010
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GATK 1.2 release notes: http://www.broadinstitute.org/gsa/wi...TK_release_1.2

From release notes:

"SB annotation is no longer calculated by default; use --computeSLOD to turn it on. Users should check out the FS annotation for a Fisher's exact test of strand bias."
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