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Old 10-03-2012, 11:42 AM   #2
westerman
Rick Westerman
 
Location: Purdue University, Indiana, USA

Join Date: Jun 2008
Posts: 1,104
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I think you will need to tell us more specifically what type of help you need. Since you have the pairwise alignments of each gene in each genome then it should simple to count up the ones in 'common'. Of course 'common' is a nebulous term -- what level of homology and length do you require.
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