View Single Post
Old 07-19-2011, 11:47 AM   #3
Location: CA

Join Date: Jan 2011
Posts: 28

Hi Mark,

I find myself in your shoes, did you figure out why you have FPKM of "0" for genes you know to be expressed? I also, find that if I use a reference annotation of dmel to run cufflinks I get "0" for FPKM, but if I run it without a reference file I get values. Any insight if you have, would be much appreciated.

nsl is offline   Reply With Quote