I copied one row from the hits_accepted.sam and try to understand the meaning of each column as there is no header in this file.
Can anyone knows help to explain what each column actually means?
Thanks in advance
GAPC:1:78:1727:245#0 0 chr1 554341 3 75M * 0 0 GTCTCAGGCTTCAACATCGAATACGCCGCAGGCCCCTTCGCCCTATTCTTCATAGCCGAATACACAAACATTATT a_YaYYaaa[`US\ZW^a`[T]N]_^^`^Xa]\^a][[]aY\\\UZ_`a^`[]Y]^^`SURXZSZTLPSFVaM_U NM:i:0
Can anyone knows help to explain what each column actually means?
Thanks in advance
GAPC:1:78:1727:245#0 0 chr1 554341 3 75M * 0 0 GTCTCAGGCTTCAACATCGAATACGCCGCAGGCCCCTTCGCCCTATTCTTCATAGCCGAATACACAAACATTATT a_YaYYaaa[`US\ZW^a`[T]N]_^^`^Xa]\^a][[]aY\\\UZ_`a^`[]Y]^^`SURXZSZTLPSFVaM_U NM:i:0
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