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Old 06-29-2012, 06:50 AM   #1
taozuo
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Location: ames, IA

Join Date: Jul 2011
Posts: 8
Default Uniquely mapped reads or multiple mapped reads?

Hi Fellows:
For calling differentially expressed genes from RNA-seq data, do you use uniquely mapped reads or multiply mapped reads as well? which one is better for this purpose? Thanks
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