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Old 04-06-2010, 08:32 AM   #1
Location: Germany

Join Date: Jan 2009
Posts: 41
Default circular genome assembling

Now I copy the first 75bp(if I have 76 long read) to the end of the sequence. However I found it's hard to sum up the mapping info for this regions(have to combine the info from two regions). Is there any well-known script to do so ?

BTW, I use BWA do the mapping.
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