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Old 03-23-2017, 11:27 AM   #2
Junior Member
Location: cambridge, MA

Join Date: Dec 2013
Posts: 6

Hi Nandan,

I hope you fixed your problem since that time.
Anyway, I think you need to convert your file in the PGDSpider own format (PGD), then concert to Bayescan format. I was having the same problem of conversion for different input format type, and it was resolved that way.

In short, convert that way in 2 steps:
VCF -> PGD -> Bayescan

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