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Old 09-13-2012, 08:18 PM   #1
camelbbs
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Location: United States

Join Date: Jun 2011
Posts: 49
Default writing script to convert bam to bed

Hi,
I want to ask if anyone write a script to convert bam to bed.

I tried bamtools bamtobed but while i import the result bed files to IGV, i see it is very different to the bam files.

So I want to ask if anyone know this.

Thanks!!
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