View Single Post
Old 01-05-2012, 03:27 AM   #1
amruta.bn
Junior Member
 
Location: India

Join Date: Jan 2012
Posts: 6
Exclamation Is SRA format to vcf conversion possible

Hi,

I am new to SRA format. Can anyone give me an introduction.
I wanted to convert SRA format to vcf format.
I have checked in SRAToolkit. It does not support direct conversion of SRA to VCF. One option i am having is that first i have to convert to fastaq and then to SAM/BAM and then i should call variants.

Can anyone please help me?
amruta.bn is offline   Reply With Quote