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Old 12-04-2013, 03:09 AM   #5
GenoMax
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Location: East Coast USA

Join Date: Feb 2008
Posts: 7,022
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Quote:
Originally Posted by mmmm View Post
how to get GFF file for a certain genome (DNA)?
Please start a new thread for questions that pertain to a new topic.

Do this to start a new thread (always a good idea to search the forum first):

1. Go to Seqanswers.com main page
2. Choose "Forums" from "site navigation menu" (left side).
3. Choose an appropriate forum for your post
4. On the subsequent forum page use the "New Thread" button at top left of the page.

That said, a GFF file may not be available for all genomes (you may need to construct one yourself). If you work with a model/common organism then you can get the files from Ensembl (http://useast.ensembl.org/info/data/ftp/index.html), UCSC or NCBI.
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