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Old 12-12-2013, 04:29 PM   #6
Senior Member
Location: Los Angeles

Join Date: Nov 2013
Posts: 142

I have a question in reply to knowing the sequence,

I know all the adapter sequences used in the RNAseq reads from ILLUMINA. I have 27 of them, and know their sequences in full.

To use trimmomatic I can use the ILLUMINACLIP:<adapters.fa>

however, I do not know how to create the correct adapter.fa file in the correct format, only knowing the name.


Thank you
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