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Old 02-01-2018, 06:54 AM   #1
k-gun12
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Location: NJ

Join Date: Feb 2010
Posts: 54
Default Alternative to CLC Genomics Workbench viewer

Qiagen has hiked the pricing and changed the licensing terms of the CLC software line to the point that I can no longer afford it after a decade of use. What I found myself using particularly in the later years was the viewer; it was useful for viewing, scrolling and annotating short-read and spliced alignments based on the mapping, piecing together gene structures, finding splice sites, polymorphisms, etc. I've tried IGV but found it a little clunky.. are there any other decent alternatives out there?

Thanks!
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