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quinlana · 04-27-2009, 09:36 AM

Hi all,
Just a note to let you know that a new release of BEDTools is now available.

What's new?

1. closestBed. Return the feature in B that is closest to A. If multiple features in B overlap A, the one with the highest overlap is returned.
2. windowBed. Added the ability to define separate windows for upstream and downstream overlaps.
3. subtractBed. Remove the portion of A that is overlapped by features in B.
4. linksBed. Creates an HTML file of intervals in a BED file. Handy for quickly navigating to interesting regions.

Aaron

04-27-2009, 09:36 AM	#4
quinlana Senior Member Location: Charlottesville Join Date: Sep 2008 Posts: 119	Version 1.2 Hi all, Just a note to let you know that a new release of BEDTools is now available. What's new? 1. closestBed. Return the feature in B that is closest to A. If multiple features in B overlap A, the one with the highest overlap is returned. 2. windowBed. Added the ability to define separate windows for upstream and downstream overlaps. 3. subtractBed. Remove the portion of A that is overlapped by features in B. 4. linksBed. Creates an HTML file of intervals in a BED file. Handy for quickly navigating to interesting regions. Aaron Last edited by quinlana; 04-27-2009 at 10:45 AM.