View Single Post
Old 04-16-2014, 04:33 PM   #23
GenoMax
Senior Member
 
Location: East Coast USA

Join Date: Feb 2008
Posts: 6,784
Default

Quote:
Originally Posted by Brian Bushnell View Post

Shellscripts:

Much better memory detection; should be able to correctly detect free physical and virtual memory in Linux so you won't have to set the -Xmx flag.
Brian: I am not nitpicking but many of us run BBMap on clusters via queuing systems so setting that flag (and the threads=n) is critical (to prevent BBMap from overstepping the queue resource limits).

Thanks!
GenoMax is offline   Reply With Quote