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Old 04-03-2017, 11:50 PM   #4
Devon Ryan
Location: Freiburg, Germany

Join Date: Jul 2011
Posts: 3,480

The presumption is that the p-value is from a poisson test, so yes it's between the two samples.

Yes, p<0.05 would normally mean differentially expressed, aside from the fact that the p-values in your case are largely meaningless.
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