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Old 01-07-2010, 02:39 PM   #1
pcg
Junior Member
 
Location: USA

Join Date: Jan 2010
Posts: 8
Default Velvet Assemby Reference

Hi All,

Can velvet align to a reference genome and if so how? Also do people have any thoughts on a good hash length. I am trying to align a transcriptome to a reference genome. I have 20M 35bp reads from Solexa.

Thanks,

Paul
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