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Old 12-10-2012, 01:28 PM   #1
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Location: Charlottesville, VA

Join Date: May 2011
Posts: 112
Default Tophat2 --fusion-search: use -G/--GTF or not?

I'm using tophat2 --fusion-search and wondering what the effect might be of supplying a gene annotation with the -G/--GTF option versus not using that option. Thoughts anyone?
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