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Old 05-28-2014, 03:27 AM   #49
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Join Date: Feb 2008
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Have you pre-built the index for "myref.fasta"?
$ ref=/path_to_your_genome.fa
This step has to be done independently of the mapping step, AFAIK.

Last edited by GenoMax; 05-28-2014 at 03:34 AM. Reason: Deleted a part not relevant to original question
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