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Old 07-18-2016, 05:57 PM   #6
Brian Bushnell
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Location: Walnut Creek, CA

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What kind of reads are these? Nextera LMP libraries, for example, are expected to produce a substantial fraction of short inserts, and those reads need to be specially processed first. If processed correctly, the long- and short-inserts will not end up in the same file.
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