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Old 04-30-2019, 07:53 PM   #6
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Location: Seattle, WA

Join Date: Mar 2010
Posts: 5

Originally Posted by GenoMax View Post
I think "bcftools view" command should give you what you need. Check the help page here.
Note that for very large vcf files, using -t/-T instead of -r/-R is going to be much faster. And use the --threads option, that will help as well.
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