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Old 10-26-2012, 06:12 PM   #5
Junior Member
Location: Seattle

Join Date: Jul 2011
Posts: 8

Originally Posted by flyboyleo View Post
3. I thought 'Trim Galore' is better for integrated Cutadapt and FastQC to consistently apply quality and adapter trimming to FastQ files together
Good that you mention cutadapt.You can use both
I used cutadapt in combination with the FASTX tools. The FASTX Barcode Splitter seems to be not so versatile.
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