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Old 06-03-2010, 08:23 AM   #47
lparsons
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Location: NJ

Join Date: Nov 2008
Posts: 28
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Excellent utility Simon. Thank you.

I'm running into what looks like an old bug, however. I'm using FASTQC version 0.3.1 on a SunOS 5.10 server and I'm getting a HeadlessException. Any tips on solving this?

Code:
Exception in thread "main" java.awt.HeadlessException: 
No X11 DISPLAY variable was set, but this program performed an operation which requires it.
        at sun.java2d.HeadlessGraphicsEnvironment.getDefaultScreenDevice(HeadlessGraphicsEnvironment.java:65)
        at javax.swing.RepaintManager.getVolatileOffscreenBuffer(RepaintManager.java:583)
        at javax.swing.JComponent.paintDoubleBuffered(JComponent.java:4911)
        at javax.swing.JComponent.paint(JComponent.java:996)
        at uk.ac.bbsrc.babraham.FastQC.Graphs.QualityBoxPlot.paint(QualityBoxPlot.java:81)
        at uk.ac.bbsrc.babraham.FastQC.Graphs.QualityBoxPlot.paint(QualityBoxPlot.java:75)
        at uk.ac.bbsrc.babraham.FastQC.Modules.PerBaseQualityScores.makeReport(PerBaseQualityScores.java:184)
        at uk.ac.bbsrc.babraham.FastQC.Report.HTMLReportArchive.<init>(HTMLReportArchive.java:63)
        at uk.ac.bbsrc.babraham.FastQC.Analysis.OfflineRunner.processFile(OfflineRunner.java:82)
        at uk.ac.bbsrc.babraham.FastQC.Analysis.OfflineRunner.<init>(OfflineRunner.java:28)
        at uk.ac.bbsrc.babraham.FastQC.FastQCApplication.main(FastQCApplication.java:71)

Last edited by lparsons; 06-03-2010 at 08:30 AM.
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