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Old 05-21-2012, 04:12 AM   #10
r_sitaram
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Location: Helsinki

Join Date: Apr 2012
Posts: 10
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Hello Simon,
This is the third best gene available. I checked the top 5 and I see this behaviour very distinct only in 2 of them. Iím attaching the pdf of that for your reference. The remaining do not highlight a lot. I should also mention that all the adjusted p values were 1. I also read another post of yours connected with DESeq where you had mentioned about a correlation between high variance and the output. I have posted a graph showing the connection between mean value and dispersion in reply #7. Does the graph hint anything? I'm not able to interpret that one very well.
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File Type: pdf Rplotcol.pdf (29.0 KB, 61 views)
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