Thread: DE Seq
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Old 08-30-2012, 07:27 AM   #1
AdrianJ217
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Location: Israel

Join Date: Aug 2012
Posts: 9
Default DE Seq

Hi, I am new to using DE Seq. I have 2 files, output from htseq, containing the name of the genes with the # of reads next to them. One file has reads before induction of rna interference (uninduced) and another after (induced). So I want to compare the read count of each gene in both files and I believe I can do that with DE-Seq. When I read the manual, it only mentions inputting one file name in the command line in R. How do I input both files? This is my first time using DE Seq. Thank you1
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