View Single Post
Old 05-19-2017, 08:31 AM   #9
GenoMax
Senior Member
 
Location: East Coast USA

Join Date: Feb 2008
Posts: 6,585
Default

It is still strange that you have a lot of poly-N type reads. Have you looked to see what % those are of the total data and as individual (%A,%G etc). What did you use as "low quality" read trim cutoff?
GenoMax is offline   Reply With Quote