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Old 01-31-2020, 05:26 AM   #5
Hedi86
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Location: Norway

Join Date: Oct 2017
Posts: 23
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thank you

we actually used two different kits for RRBS library preparation, I figured out that there is lots of short reads under 70 bp in the first method and using another method the peak of read length was about 130 bp which we would like to have, as you mentioned longer reads tend to align better. but surprisingly mapping was almost the same, that's why i was curious to look at the length of those aligned reads in both libraries.

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