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Old 01-19-2011, 02:57 PM   #13
skruglyak
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Location: San Diego

Join Date: Sep 2010
Posts: 44
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Quote:
Originally Posted by selen View Post
Semyon,

Can you please post more information about the directory structure and how you set it up by project/sample names?

Thanks
Selen

Hi Selen,

The most common use case will be through a sample sheet. Each row of the sample sheet would contain information including Lane, Index, Sample Name, and Project Name. The folder structure would then be created based on the names in the sample sheet. We recommend always having a sample sheet, but if one is not provided, we would use a set of simple default names. We would assume that there is just one project and that each lane contains a separate sample.

A diagram of the actual directory structure was in the appendix of the original attachment, so I am not sure what additional information you may want. Please let me know and I will do my best to answer.

Thanks,

Semyon
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