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Old 06-02-2013, 03:53 PM   #1
lkral
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Location: Carrollton, GA

Join Date: May 2011
Posts: 27
Default Is this assembly reasonable?

I have completed some de novo assemblies of MiSeq generated 250PE reads with Minia and SSPACE. I've posted a description of the outcomes and some quality checks at the following site:

http://www.dartergenomics.org/tallapoosa-darter-genome

For those of you with experience in assemblies, could you please look this over and let me know if the scaffold distributions I ended up with are reasonable given the MiSeq data?

Thanks.
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