[titaji]

Start looking at FASTA.fa.p3out FASTA.fa.misa files to make sure that they are not empty or have some other issues in terms of format/content.

Hi GenoMax

I have the same problem as Daniel. But in my case, the *.p3in file is empty after I put this syntax

p3_in.pl FASTA.fa.misa

Could you tell me what might happen?

Thank you,
titaji