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Old 01-23-2014, 09:01 AM   #1
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Location: Brussels

Join Date: Jan 2014
Posts: 1
Default Need some help with PacBioToCA

Hello everybody,
I'm a novice in genome assembly (and particularly with illumina and pacbio data) and I'm working on the genome of a symbiotic bacteria.

For the moment, I tried hybrid assemblies with MIRA using Pacbio corrected seed reads (from HGAP2) and Illumina paired-end and mate pair reads. Now, I would like to correct my Pacbio long-reads with my Illumina data but I need some helps to perform this task. I know that there are advices on the SourceForge page but it is unclear for me. Briefly, I don't understand how install and use the PacbioToCA pipeline !

Thanks in advance for your help.
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