This is kind of the wrong place to post this question given that we are all analysts who do the work (mostly at universities) rather than sending it out. But I would like to know what companies that do analysis that is out-sourced generally charge. Consider an experiment such as this--three biological replicates, each with three samples:
What do you think an investigator would need to pay to outsource standard analysis:
1. Sample quality
1. Gene expression per sample
1. Cross-sample FDR within replicate
1. Cross-replicate FDR
1. Pathway analysis
1. Standard visualizations (MDS, PCA, MA, heatmap, venn)
Code:
| sample | treatment | replicate | |--------|-----------|-----------| | t1_A | Tx1 | A | | t2_A | Tx2 | A | | c_A | control | A | | t1_B | Tx1 | B | | t2_B | Tx2 | B | | c_B | control | B | | t1_C | Tx1 | C | | t2_C | Tx2 | C | | c_C | control | C |
1. Sample quality
1. Gene expression per sample
1. Cross-sample FDR within replicate
1. Cross-replicate FDR
1. Pathway analysis
1. Standard visualizations (MDS, PCA, MA, heatmap, venn)
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