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Old 07-16-2013, 03:42 AM   #3
priya
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Location: sweden

Join Date: Apr 2013
Posts: 57
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Quote:
Originally Posted by dpryan View Post
Yeah, have a look at this thread on Biostars for some example commands. Allegedly, you can also use cmpfastq, which is a perl script, to do this too (I've never used this so I can't say that it works properly).

In the future, use a trimmer that handles both reads of a pair at once so you can avoid these issues.
Thanks for your reply.I will look into it..
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