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Old 09-08-2015, 09:41 AM   #2
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Location: Bethesda MD

Join Date: Oct 2009
Posts: 509

No problem - in fact, the latest version of SAMtools variant-calling workflow uses GATK's realigner and base recalibrator.

Last edited by HESmith; 09-08-2015 at 12:22 PM. Reason: typo
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