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Old 01-23-2012, 03:57 PM   #4
Location: Davis, CA

Join Date: Aug 2008
Posts: 88

Can I ask, biocomfun, how you used CORAL to correct 454 reads using Illumina reads? As far as I can tell, CORAL simply takes a set of reads and does multiple alignment ... i.e. you can't specify a set of reads to be corrected and a different set of reads to be trusted and used for correction. What did you do, merge your 454 and Illumina reads into one fastq file?
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