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Old 06-05-2014, 04:02 PM   #3
Brian Bushnell
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Location: Walnut Creek, CA

Join Date: Jan 2014
Posts: 2,707

I have updated the speed results by moving the input and output files to a ramdisk to eliminate I/O bottlenecks, and finishing all datapoints for PEAR. Results attached. Also, if anyone has a different program they use for read merging that they want added to the roundup, please post it here before my test data is purged from /scratch in ~6 weeks.

Originally Posted by GenoMax View Post
Brian: You have put a single help document together for all the programs in BBMap. I am not sure you have done that.

I am losing track of all the programs that are now part of BBMap suite
I am too... I definitely need to put together such a document! Hopefully soon. I have an internal document describing them but it's not totally relevant outside our cluster.
Attached Images
File Type: png BBMerge_Speed2.png (21.0 KB, 71 views)
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